Collapse Command Arguments

When submitting jobs to the Swiss Army Knife, this function is a convenience function to collapse the function arguments into a single call before submitting the call to [dx_run_swiss_army_knife()].

Usage

collapse_cmd_args(cmd, args)

Arguments

cmd

Character. The command to be run, e.g. `plink2`

args

Character. Vector of the arguments to `cmd`.

Value

A single character string that can be passed to the `-icmd` flag of the Swiss Army Knife

Examples

if (FALSE) { # \dontrun{
args <- "plink2"
cmd <- c("pfile", "ofh_data", "--make-bed", "--out", "ofh_data_bed")

collapse_cmd_args(args, cmd)
} # }